Package: batchtma 0.1.7

Konrad Stopsack

batchtma: Batch Effect Adjustments

Different adjustment methods for batch effects in biomarker data, such as from tissue microarrays. Some methods attempt to retain differences between batches that may be due to between-batch differences in "biological" factors that influence biomarker values.

Authors:Konrad Stopsack [aut, cre], Travis Gerke [aut]

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Peer review:

Bug tracker:https://github.com/stopsack/batchtma/issues

On CRAN:

batch-effectsmeasurement-errortissue-microarray-analysis

3 exports 1 stars 1.02 score 46 dependencies 3 scripts 273 downloads

Last updated 3 months agofrom:8e90812a1c. Checks:OK: 7. Indexed: yes.

Exports:adjust_batchdiagnose_modelsplot_batch

Dependencies:backportsbroomclicolorspacecpp11dplyrfansifarvergeepackgenericsggplot2gluegtableisobandlabelinglatticelifecyclelimmamagrittrMASSMatrixMatrixModelsmgcvmunsellnlmennetpillarpkgconfigpurrrquantregR6RColorBrewerrlangscalesSparseMstatmodstringistringrsurvivaltibbletidyrtidyselectutf8vctrsviridisLitewithr